Public tools

Public releases only. In-progress pipelines are not listed here.

EFM Recovery RCT Stata

Released 2026

Public Stata release of the Bolus vs Continuous EFM recovery RCT analysis.

Cumulative recovery proportion by arm, from the public release (Figure 3).

CRCPolarCMS

Released 2022

Code release for the 62-gene colorectal panel and polar CMS subtype visualization.

  • CMS1
  • CMS2_1
  • CMS2_2
  • CMS3
  • CMS4_1
  • CMS4_2
  • CMS4_3
Abstract polar scatter from the published CMS cluster layout. The blue arc is directional GSEA. Red is up-regulation. Blue is down-regulation. White is near the center. Hover to sweep.